PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.PNX61
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 308aa    MW: 34840.8 Da    PI: 5.8025
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.PNX61genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.41.1e-26241671128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                  lppG+rFhP++e l+ +yL++k  + +        ++ ++ i+e+d y+++P +Lp        + +++++wy F++ + +  +  +++r++ksg+W 
  Araip.PNX61  24 LPPGCRFHPSEELLLRYYLTNKNGTGNwngngglgFDGSDLIRELDFYDYDPFELPDfacfayGYGGRRRHWYCFTSVRVSRGERWKRKRKVKSGFWL 121
                  79********************9999988888888777789***************44777654445777******9999999988999999****** PP

          NAM  85 atgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                    g+  +v    ++ + g+++ +vfy g +a++g +tdWv+ ey+l
  Araip.PNX61 122 RRGRVSNVNGVgENVVLGTRTRFVFYMGdSAKNGARTDWVLYEYAL 167
                  ********998566679*********987899************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-3120183IPR003441NAC domain
PROSITE profilePS5100534.39624183IPR003441NAC domain
PfamPF023656.8E-1625167IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEQEEEPQQN EPPHSHSQSR CVTLPPGCRF HPSEELLLRY YLTNKNGTGN WNGNGGLGFD  60
GSDLIRELDF YDYDPFELPD FACFAYGYGG RRRHWYCFTS VRVSRGERWK RKRKVKSGFW  120
LRRGRVSNVN GVGENVVLGT RTRFVFYMGD SAKNGARTDW VLYEYALVDH VMASYVLCRV  180
FSKPRYKNSA SDIGLSCCAE ESVSAVRHIG IQHDEHVKLD AVEAKVCDDI SIDHNNEICA  240
GGNSDNDNQV KNAHDIDALR CLAGPQGSQQ ERLPLLPSSS TMFIEAISSP QQLLSITEED  300
FIELNDLT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B2e-182218315165NAC domain-containing protein 19
4dul_A2e-182218315165NAC domain-containing protein 19
1ut7_B2e-182218315165NO APICAL MERISTEM PROTEIN
1ut7_A2e-182218315165NO APICAL MERISTEM PROTEIN
1ut4_B2e-182218315165NO APICAL MERISTEM PROTEIN
1ut4_A2e-182218315165NO APICAL MERISTEM PROTEIN
3swp_D2e-182218318168NAC domain-containing protein 19
3swp_C2e-182218318168NAC domain-containing protein 19
3swp_B2e-182218318168NAC domain-containing protein 19
3swp_A2e-182218318168NAC domain-containing protein 19
3swm_D2e-182218318168NAC domain-containing protein 19
3swm_C2e-182218318168NAC domain-containing protein 19
3swm_B2e-182218318168NAC domain-containing protein 19
3swm_A2e-182218318168NAC domain-containing protein 19
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190112RRRHWYCFTSVRVSRGERWKRKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163090.10.0PREDICTED: NAC domain-containing protein 76-like isoform X2
TrEMBLV7CVC71e-101V7CVC7_PHAVU; Uncharacterized protein
STRINGGLYMA14G09240.13e-99(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130012628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.22e-18NAC domain containing protein 50